ClinVar Miner

Submissions for variant NC_000010.10:g.(?_126089399)_(126089563_?)del

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV003109317 SCV003792025 pathogenic Ornithine aminotransferase deficiency 2022-02-25 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. This variant disrupts a region of the OAT protein in which other variant(s) (p.Arg426*) have been determined to be pathogenic (PMID: 1609808, 23076989, 24429551). This suggests that this is a clinically significant region of the protein, and that variants that disrupt it are likely to be disease-causing. This variant has not been reported in the literature in individuals affected with OAT-related conditions. This variant is a gross deletion of the genomic region encompassing exon(s) 9 of the OAT gene. While this deletion is not anticipated to lead to nonsense mediated decay, it is expected to disrupt the C-terminus of the protein.

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