ClinVar Miner

Submissions for variant NC_000010.11:g.(?_86838865)_(86900126_?)del

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000457913 SCV000564026 pathogenic Generalized juvenile polyposis/juvenile polyposis coli 2016-10-18 criteria provided, single submitter clinical testing This variant is a gross deletion of the genomic region encompassing the promoter and coding exons 3-7 of the BMPR1A gene, which includes the initiator codon. The deletion extends beyond the edge of the assayed region, and the 5' boundary of this event is not known. The 3' boundary is likely confined to intron 7 of the BMPR1A gene. This is expected to result in an absent or disrupted protein product. While this particular variant has not been reported in the literature, loss-of-function variants in BMPR1A are known to be pathogenic (PMID: 11536076, 12417513). For these reasons, this variant has been classified as Pathogenic.

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