Total submissions: 1
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Invitae | RCV003107366 | SCV003793543 | pathogenic | Smith-Lemli-Opitz syndrome | 2022-08-13 | criteria provided, single submitter | clinical testing | This variant results in the deletion of exons 4-8 and part of exon 9 (c.99-38_1175del) of the DHCR7 gene. While this variant is not anticipated to result in nonsense mediated decay, it likely alters RNA splicing and results in a disrupted protein product. This variant has not been reported in the literature in individuals affected with DHCR7-related conditions. Variants that disrupt the consensus splice site are a relatively common cause of aberrant splicing (PMID: 17576681, 9536098). This variant disrupts a region of the DHCR7 protein in which other variant(s) (p.Cys380Arg) have been determined to be pathogenic (PMID: 15896653, 17441222, 31395954). This suggests that this is a clinically significant region of the protein, and that variants that disrupt it are likely to be disease-causing. For these reasons, this variant has been classified as Pathogenic. |