Total submissions: 1
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Labcorp Genetics |
RCV000821295 | SCV000962049 | pathogenic | Familial hypercholesterolemia | 2019-07-26 | criteria provided, single submitter | clinical testing | This variant is an in-frame deletion of the genomic region encompassing exons 2-3 of the LDLR gene. It preserves the integrity of the reading frame. A similar deletion of exons 2-3 has been reported in several individuals affected with familial hypercholesterolemia, and it has been observed to segregate with this disease in families (PMID: 1301956, 12052488, 2805380, 2544509). This variant deletes cysteine residues located within an LDLRA or epidermal-growth-factor (EGF)-like domains of the LDLR protein. Cysteine residues in these domains have been shown to be involved in the formation of disulfide bridges, which are critical for protein structure and stability (PMID: 7548065, 7603991, 7979249). In addition, missense substitutions within the LDLRA and EGF-like domains affecting cysteine residues are overrepresented among patients with hypercholesterolemia (PMID: 18325082). For these reasons, this variant has been classified as Pathogenic. |