ClinVar Miner

Submissions for variant NC_000021.8:g.(?_32439271)_(39212984_?)dup

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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001939883 SCV002186768 uncertain significance Amyotrophic lateral sclerosis type 1 2022-10-07 criteria provided, single submitter clinical testing A copy number gain of the genomic region encompassing the full coding sequence of the SOD1 gene has been identified. The boundaries of this event are unknown as they extend beyond the assayed region for this gene and therefore may encompass additional genes. As the precise location of this event is unknown, it may be in tandem or it may be located elsewhere in the genome. A similar copy number variant has been observed in individual(s) with clinical features of amyotrophic lateral sclerosis (Invitae). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Labcorp Genetics (formerly Invitae), Labcorp RCV003107882 SCV003793571 uncertain significance DYRK1A-related intellectual disability syndrome 2022-10-27 criteria provided, single submitter clinical testing A copy number gain of the genomic region encompassing the full coding sequence of the DYRK1A gene has been identified. The boundaries of this event are unknown as they extend beyond the assayed region for this gene and therefore may encompass additional genes. As the precise location of this event is unknown, it may be in tandem or it may be located elsewhere in the genome. Isolated whole-gene copy number gains of DYRK1A have not been reported in the literature. However, larger copy number events that include this gene have been reported (PMID: 17237124, 23512985). Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Labcorp Genetics (formerly Invitae), Labcorp RCV004579580 SCV005068070 uncertain significance Hereditary thrombocytopenia and hematological cancer predisposition syndrome associated with RUNX1 2024-01-23 criteria provided, single submitter clinical testing A copy number gain of the genomic region encompassing the full coding sequence of the RUNX1 gene has been identified. The boundaries of this event are unknown as they extend beyond the assayed region for this gene and therefore may encompass additional genes. As the precise location of this event is unknown, it may be in tandem or it may be located elsewhere in the genome. A similar copy number variant has been observed in individual(s) with pancytopenia (Invitae). Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Labcorp Genetics (formerly Invitae), Labcorp RCV004579581 SCV005068082 uncertain significance Immunodeficiency 28 2024-01-23 criteria provided, single submitter clinical testing A copy number gain of the genomic region encompassing the full coding sequence of the IFNGR2 gene has been identified. The boundaries of this event are unknown as they extend beyond the assayed region for this gene and therefore may encompass additional genes. As the precise location of this event is unknown, it may be in tandem or it may be located elsewhere in the genome. This variant has not been reported in the literature in individuals affected with IFNGR2-related conditions. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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