ClinVar Miner

Submissions for variant NC_000023.10:g.(?_152991389)_(152991912_?)del

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV004583018 SCV005064092 pathogenic Adrenoleukodystrophy 2019-11-14 criteria provided, single submitter clinical testing Loss-of-function variants in ABCD1 are known to be pathogenic (PMID: 11748843). For these reasons, this variant has been classified as Pathogenic. This variant disrupts the p.Tyr296 amino acid residue in ABCD1. Other variant(s) that disrupt this residue have been determined to be pathogenic (PMID: 10190819, 11748843, 15800013, 16087056, 16415970, 21068741, 22479560, 25275259, 26454440). This suggests that this residue is clinically significant, and that variants that disrupt this residue are likely to be disease-causing. This variant has not been reported in the literature in individuals with ABCD1-related conditions. The frequency data for this variant in the population databases is considered unreliable, as metrics indicate insufficient coverage at this position in the ExAC database. This variant results in the deletion of part of exon 1 (c.668_900+291del) of the ABCD1 gene. It is expected to disrupt RNA splicing and likely results in an absent or disrupted protein product.

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