ClinVar Miner

Submissions for variant NC_000023.10:g.(?_62875364)_(62944601_?)del

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001380003 SCV001577923 likely pathogenic Developmental and epileptic encephalopathy, 8 2020-09-03 criteria provided, single submitter clinical testing This variant is a gross deletion of the genomic region encompassing exon(s) 2-8 of the ARHGEF9 gene. While this deletion is not anticipated to result in nonsense mediated decay, it is expected to create a truncated protein product. This variant has been observed in individual(s) with clinical features of ARHGEF9-related conditions (Invitae). This variant disrupts the p.Arg338 amino acid residue in ARHGEF9. Other variant(s) that disrupt this residue have been determined to be pathogenic (PMID: 26834553, Invitae). This suggests that this residue is clinically significant, and that variants that disrupt this residue are likely to be disease-causing. In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic.

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