ClinVar Miner

Submissions for variant NC_000023.10:g.(32591964_32613873)_(32613994_32632419)dup

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV001269239 SCV001448559 likely benign not specified 2022-12-15 criteria provided, single submitter clinical testing Variant summary: The variant identified by MLPA or other technology involves the duplication of exon 13 in the DMD gene. A presumed nomenclature of c.(1482+1_1483-1)_(1602+1_1603-1)dup has been designated for the purposes of this classification. It has been assumed that this is a tandem duplication in direct orientation (Richardson_GIM_2018, Newman_AJHG_2015). Although exact breakpoints of this duplication are not known, it is expected to result in an in-frame duplication, resulting in the insertion of 40 amino acids into spectrin repeat 2 in the central rod domain (UniProt) of the DMD gene. A large duplication variant (size: 26,434 bp) encompassing exon 13 is reported in 18 / 15814 alleles, including 17 hemizygotes in the gnomAD database, structural variants dataset. The highest variant frequency is reported within the African or African-American subpopulation (10 hemizygotes), strongly suggesting that the variant is a benign polymorphism. To our knowledge, no occurrence of c.(1482+1_1483-1)_(1602+1_1603-1)dup in individuals affected with Dystrophinopathies and no experimental evidence demonstrating its impact on protein function have been reported. One clinical diagnostic laboratory has submitted clinical-significance assessments for this variant to ClinVar after 2014 and classified the variant as uncertain significance. Based on the evidence outlined above, the variant was classified as likely benign.

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