ClinVar Miner

Submissions for variant NM_000033.4(ABCD1):c.1899C>G (p.Ser633Arg)

dbSNP: rs202125585
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001230853 SCV001403352 pathogenic Adrenoleukodystrophy 2019-11-06 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. This variant disrupts the p.Ser633 amino acid residue in ABCD1. Other variant(s) that disrupt this residue have been observed in individuals with ABCD1-related conditions (PMID: 11438993), which suggests that this may be a clinically significant amino acid residue. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). This variant has been observed in individual(s) with adrenoleukodystrophy (PMID: 21700483, 10737980). In at least one individual the variant was observed to be de novo. This variant is not present in population databases (ExAC no frequency). This sequence change replaces serine with arginine at codon 633 of the ABCD1 protein (p.Ser633Arg). The serine residue is moderately conserved and there is a moderate physicochemical difference between serine and arginine.
Revvity Omics, Revvity RCV003130204 SCV003810366 likely pathogenic not provided 2021-12-09 criteria provided, single submitter clinical testing

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