ClinVar Miner

Submissions for variant NM_000033.4(ABCD1):c.311G>A (p.Arg104His) (rs1557052302)

Minimum review status: Collection method:
Minimum conflict level:
ClinVar version:
Total submissions: 2
Download table as spreadsheet
Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000544041 SCV000630005 pathogenic Adrenoleukodystrophy 2019-08-21 criteria provided, single submitter clinical testing This sequence change replaces arginine with histidine at codon 104 of the ABCD1 protein (p.Arg104His). The arginine residue is highly conserved and there is a small physicochemical difference between arginine and histidine. This variant is not present in population databases (ExAC no frequency). This variant has been reported in several individuals affected with X-linked adrenoleukodystrophy (PMID: 7717396, 11336405, 11748843, 16415970). Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive, but these predictions have not been confirmed by published functional studies. A different missense substitution at this codon (p.Arg104Cys) has been determined to be pathogenic (PMID: 7825602, 11102997, 26454440, 17542813). This suggests that the arginine residue is critical for ABCD1 protein function and that other missense substitutions at this position may also be pathogenic. For these reasons, this variant has been classified as Pathogenic.
Institute of Human Genetics, University of Leipzig Medical Center RCV000544041 SCV001428459 pathogenic Adrenoleukodystrophy 2019-05-03 criteria provided, single submitter clinical testing This variant was identified as hemizygous

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.