ClinVar Miner

Submissions for variant NM_000038.6(APC):c.*2AG[4]

dbSNP: rs758692443
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Color Diagnostics, LLC DBA Color Health RCV001181202 SCV001346302 uncertain significance Hereditary cancer-predisposing syndrome 2022-01-03 criteria provided, single submitter clinical testing This variant is located in the 3' untranslated region of APC gene. To our knowledge, functional studies have not been reported for this variant. This variant has not been reported in individuals affected with hereditary cancer in the literature. This variant has been identified in 2/250204 chromosomes in the general population by the Genome Aggregation Database (gnomAD). The available evidence is insufficient to determine the role of this variant in disease conclusively. Therefore, this variant is classified as a Variant of Uncertain Significance.
GeneDx RCV001712872 SCV001944113 likely benign not provided 2019-10-08 criteria provided, single submitter clinical testing
Quest Diagnostics Nichols Institute San Juan Capistrano RCV001712872 SCV002774088 uncertain significance not provided 2024-11-16 criteria provided, single submitter clinical testing The APC c.*6_*7dup variant has not been reported in individuals with APC-related conditions in the published literature. The frequency of this variant in the general population, 0.000008 (2/250204 chromosomes (Genome Aggregation Database, http://gnomad.broadinstitute.org)), is uninformative in the assessment of its pathogenicity. Based on the available information, we are unable to determine the clinical significance of this variant.
Myriad Genetics, Inc. RCV004789425 SCV005406858 benign Familial adenomatous polyposis 1 2024-09-30 criteria provided, single submitter clinical testing This variant is considered benign. This variant occurs in the non-coding 3' untranslated region of the gene, and is not expected to impact protein function.
PreventionGenetics, part of Exact Sciences RCV003928776 SCV004744362 likely benign APC-related disorder 2019-10-07 no assertion criteria provided clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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