ClinVar Miner

Submissions for variant NM_000038.6(APC):c.1124del (p.Gly375fs)

dbSNP: rs876658538
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV000221309 SCV000273918 pathogenic Hereditary cancer-predisposing syndrome 2023-02-14 criteria provided, single submitter clinical testing The c.1124delG pathogenic mutation, located in coding exon 9 of the APC gene, results from a deletion of one nucleotide at nucleotide position 1124, causing a translational frameshift with a predicted alternate stop codon (p.G375Afs*79). This alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay. As such, this alteration is interpreted as a disease-causing mutation.
Invitae RCV003743649 SCV003302070 pathogenic Familial adenomatous polyposis 1 2022-01-20 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. ClinVar contains an entry for this variant (Variation ID: 230384). This variant has not been reported in the literature in individuals affected with APC-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change creates a premature translational stop signal (p.Gly375Alafs*79) in the APC gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in APC are known to be pathogenic (PMID: 17963004, 20685668).
Myriad Genetics, Inc. RCV002518265 SCV004044199 pathogenic Familial adenomatous polyposis 1 2023-04-28 criteria provided, single submitter clinical testing This variant is considered pathogenic. This variant creates a frameshift predicted to result in premature protein truncation.

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