ClinVar Miner

Submissions for variant NM_000038.6(APC):c.2616_2617inv (p.Ser873Thr)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000815091 SCV000955534 uncertain significance Familial adenomatous polyposis 1 2018-08-03 criteria provided, single submitter clinical testing This sequence change replaces serine with threonine at codon 873 of the APC protein (p.Ser873Thr). The serine residue is highly conserved and there is a small physicochemical difference between serine and threonine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with APC-related disease. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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