ClinVar Miner

Submissions for variant NM_000038.6(APC):c.2804A>G (p.Tyr935Cys)

dbSNP: rs1554084481
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001868289 SCV002178344 uncertain significance Familial adenomatous polyposis 1 2022-09-07 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. ClinVar contains an entry for this variant (Variation ID: 559950). This variant has not been reported in the literature in individuals affected with APC-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces tyrosine, which is neutral and polar, with cysteine, which is neutral and slightly polar, at codon 935 of the APC protein (p.Tyr935Cys).
GeneDx RCV002274086 SCV002559669 uncertain significance not provided 2022-08-03 criteria provided, single submitter clinical testing Not observed at significant frequency in large population cohorts (gnomAD); In silico analysis supports that this missense variant does not alter protein structure/function; Has not been previously published as pathogenic or benign to our knowledge
3DMed Clinical Laboratory Inc RCV000677747 SCV000803903 uncertain significance Neoplasm of the liver 2017-05-08 no assertion criteria provided clinical testing

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