ClinVar Miner

Submissions for variant NM_000038.6(APC):c.3257A>G (p.His1086Arg)

dbSNP: rs2149888108
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV004564831 SCV002197475 uncertain significance Familial adenomatous polyposis 1 2021-09-29 criteria provided, single submitter clinical testing This sequence change replaces histidine with arginine at codon 1086 of the APC protein (p.His1086Arg). The histidine residue is highly conserved and there is a small physicochemical difference between histidine and arginine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals affected with APC-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
GeneDx RCV002463071 SCV002756919 uncertain significance not provided 2022-05-05 criteria provided, single submitter clinical testing Not observed at significant frequency in large population cohorts (gnomAD); In silico analysis supports that this missense variant does not alter protein structure/function; Has not been previously published as pathogenic or benign to our knowledge; This variant is associated with the following publications: (PMID: 18199528)
Baylor Genetics RCV004564831 SCV005053683 uncertain significance Familial adenomatous polyposis 1 2024-02-23 criteria provided, single submitter clinical testing

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