ClinVar Miner

Submissions for variant NM_000038.6(APC):c.5473G>T (p.Asp1825Tyr)

dbSNP: rs1203079846
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV003653260 SCV004486733 uncertain significance Familial adenomatous polyposis 1 2022-11-29 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt APC protein function. ClinVar contains an entry for this variant (Variation ID: 559951). This variant has not been reported in the literature in individuals affected with APC-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces aspartic acid, which is acidic and polar, with tyrosine, which is neutral and polar, at codon 1825 of the APC protein (p.Asp1825Tyr).
3DMed Clinical Laboratory Inc RCV000677750 SCV000803906 uncertain significance Gastrointestinal stromal tumor of small intestine 2017-06-14 no assertion criteria provided clinical testing

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