ClinVar Miner

Submissions for variant NM_000038.6(APC):c.5479C>G (p.Leu1827Val)

dbSNP: rs876660007
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV003538436 SCV000768069 uncertain significance Familial adenomatous polyposis 1 2017-10-14 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The valine amino acid residue is found in multiple mammalian species, suggesting that this missense change does not adversely affect protein function. These predictions have not been confirmed by published functional studies and their clinical significance is uncertain. This variant has not been reported in the literature in individuals with APC-related disease. This variant is not present in population databases (ExAC no frequency). This sequence change replaces leucine with valine at codon 1827 of the APC protein (p.Leu1827Val). The leucine residue is moderately conserved and there is a small physicochemical difference between leucine and valine.

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