ClinVar Miner

Submissions for variant NM_000038.6(APC):c.6093_6095delinsAC (p.Ser2031fs) (rs879254155)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000236218 SCV000293669 likely pathogenic not provided 2015-12-11 criteria provided, single submitter clinical testing This combined deletion and insertion is denoted APC c.6093_6095delTATinsAC at the cDNA level and p.Ser2031ArgfsX13 (S2031RfsX13) at the protein level. The normal sequence, with the bases that are deleted in braces and inserted in brackets, is TTAG[TAT][AC]TGAC. The variant causes a frameshift, which changes a Serine to an Arginine at codon 2031, and creates a premature stop codon at position 13 of the new reading frame. Even though this frameshift occurs in the last exon of the gene, and nonsense-mediated decay is not expected to occur, it is significant since the last 813 amino acids are replaced by 12 incorrect amino acids. Although this variant has not, to our knowledge, been reported in the literature, it is predicted to cause loss of normal protein function through protein truncation. Based on the currently available information, we consider APC c.6093_6095delTATinsAC to be a likely pathogenic variant.

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