ClinVar Miner

Submissions for variant NM_000038.6(APC):c.7660C>T (p.His2554Tyr) (rs1213302882)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000646282 SCV000768050 uncertain significance Familial adenomatous polyposis 1 2017-10-08 criteria provided, single submitter clinical testing This sequence change replaces histidine with tyrosine at codon 2554 of the APC protein (p.His2554Tyr). The histidine residue is highly conserved and there is a moderate physicochemical difference between histidine and tyrosine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with APC-related disease. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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