ClinVar Miner

Submissions for variant NM_000051.4(ATM):c.8848_8850+3del

dbSNP: rs2137353827
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001361892 SCV001557883 uncertain significance Ataxia-telangiectasia syndrome 2020-09-20 criteria provided, single submitter clinical testing This variant, c.8845_8850del, results in the deletion of 2 amino acid(s) of the ATM protein (p.Val2949_Glu2950del), but otherwise preserves the integrity of the reading frame. This variant also falls at the last nucleotide of exon 61 of the ATM coding sequence, which is part of the consensus splice site for this exon. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with ATM-related conditions. Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. Nucleotide substitutions within the consensus splice site are a relatively common cause of aberrant splicing (PMID: 17576681, 9536098). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site, but this prediction has not been confirmed by published transcriptional studies. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Myriad Genetics, Inc. RCV004036815 SCV004930732 likely pathogenic Familial cancer of breast 2024-02-05 criteria provided, single submitter clinical testing This variant is considered likely pathogenic. This variant occurs within a consensus splice junction and is predicted to result in abnormal mRNA splicing of either an out-of-frame exon or an in-frame exon necessary for protein stability and/or normal function.

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