ClinVar Miner

Submissions for variant NM_000051.4(ATM):c.977T>C (p.Ile326Thr)

gnomAD frequency: 0.00001  dbSNP: rs768720856
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV000222223 SCV000277619 uncertain significance Hereditary cancer-predisposing syndrome 2020-03-11 criteria provided, single submitter clinical testing The p.I326T variant (also known as c.977T>C), located in coding exon 7 of the ATM gene, results from a T to C substitution at nucleotide position 977. The isoleucine at codon 326 is replaced by threonine, an amino acid with similar properties. This alteration has been reported in a cohort of 488 patients with stages I to III breast cancer who were tested with a 25-gene panel test (Tung N et al. J. Clin. Oncol., 2016 May;34:1460-8). This amino acid position is well conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Color Diagnostics, LLC DBA Color Health RCV000222223 SCV000904869 uncertain significance Hereditary cancer-predisposing syndrome 2018-12-12 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV001038222 SCV001201685 uncertain significance Ataxia-telangiectasia syndrome 2023-05-13 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be disruptive. ClinVar contains an entry for this variant (Variation ID: 233276). This missense change has been observed in individual(s) with breast cancer (PMID: 26976419). This variant is present in population databases (no rsID available, gnomAD 0.004%). This sequence change replaces isoleucine, which is neutral and non-polar, with threonine, which is neutral and polar, at codon 326 of the ATM protein (p.Ile326Thr).
Athena Diagnostics RCV001658040 SCV001879620 uncertain significance not provided 2021-04-19 criteria provided, single submitter clinical testing
Baylor Genetics RCV003469071 SCV004212152 uncertain significance Familial cancer of breast 2022-12-10 criteria provided, single submitter clinical testing

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