Total submissions: 2
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Invitae | RCV000907741 | SCV001052466 | likely benign | Menkes kinky-hair syndrome; Cutis laxa, X-linked; X-linked distal spinal muscular atrophy type 3 | 2024-01-06 | criteria provided, single submitter | clinical testing | |
Ambry Genetics | RCV002416121 | SCV002718817 | uncertain significance | Inborn genetic diseases | 2020-08-06 | criteria provided, single submitter | clinical testing | The p.R652W variant (also known as c.1954C>T), located in coding exon 8 of the ATP7A gene, results from a C to T substitution at nucleotide position 1954. The arginine at codon 652 is replaced by tryptophan, an amino acid with dissimilar properties. Based on data from gnomAD, the c.1954C>T variant has an overall frequency of 0.004% (9/204,698) of total alleles studied. The highest observed frequency was 0.02% (4/18,955) in the African sub-population, with no hemizygotes observed. This amino acid position is not well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear. |