ClinVar Miner

Submissions for variant NM_000053.4(ATP7B):c.2866-13G>C

gnomAD frequency: 0.10642  dbSNP: rs7325983
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Total submissions: 13
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000029358 SCV000052005 benign Wilson disease 2011-08-18 criteria provided, single submitter curation Converted during submission to Benign.
Eurofins Ntd Llc (ga) RCV000078045 SCV000109883 benign not specified 2014-07-11 criteria provided, single submitter clinical testing
Genetic Services Laboratory, University of Chicago RCV000078045 SCV000192334 benign not specified 2013-02-08 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV000078045 SCV000301707 benign not specified criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000029358 SCV000384665 benign Wilson disease 2018-01-12 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
GeneDx RCV000078045 SCV000518516 benign not specified 2015-12-04 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000029358 SCV000602594 benign Wilson disease 2022-02-14 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000029358 SCV001729950 benign Wilson disease 2024-02-01 criteria provided, single submitter clinical testing
Genome-Nilou Lab RCV000029358 SCV001750134 benign Wilson disease 2021-07-01 criteria provided, single submitter clinical testing
Color Diagnostics, LLC DBA Color Health RCV000029358 SCV004362478 benign Wilson disease 2019-03-29 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV004706448 SCV005230369 benign not provided criteria provided, single submitter not provided
Genome Diagnostics Laboratory, Amsterdam University Medical Center RCV000078045 SCV001808144 benign not specified no assertion criteria provided clinical testing
Clinical Genetics, Academic Medical Center RCV000078045 SCV001923159 benign not specified no assertion criteria provided clinical testing

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