ClinVar Miner

Submissions for variant NM_000057.4(BLM):c.1418C>T (p.Thr473Ile)

gnomAD frequency: 0.00001  dbSNP: rs761284618
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000820877 SCV000961610 uncertain significance Bloom syndrome 2023-06-13 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt BLM protein function. ClinVar contains an entry for this variant (Variation ID: 663081). This variant has not been reported in the literature in individuals affected with BLM-related conditions. This variant is present in population databases (rs761284618, gnomAD 0.007%). This sequence change replaces threonine, which is neutral and polar, with isoleucine, which is neutral and non-polar, at codon 473 of the BLM protein (p.Thr473Ile).
Ambry Genetics RCV002390693 SCV002696576 uncertain significance Hereditary cancer-predisposing syndrome 2021-07-23 criteria provided, single submitter clinical testing The p.T473I variant (also known as c.1418C>T), located in coding exon 6 of the BLM gene, results from a C to T substitution at nucleotide position 1418. The threonine at codon 473 is replaced by isoleucine, an amino acid with similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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