ClinVar Miner

Submissions for variant NM_000057.4(BLM):c.3389T>C (p.Ile1130Thr)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV003614272 SCV004375474 uncertain significance Bloom syndrome 2023-08-10 criteria provided, single submitter clinical testing This sequence change replaces isoleucine, which is neutral and non-polar, with threonine, which is neutral and polar, at codon 1130 of the BLM protein (p.Ile1130Thr). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with BLM-related conditions. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) has been performed at Invitae for this missense variant, however the output from this modeling did not meet the statistical confidence thresholds required to predict the impact of this variant on BLM protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV004371514 SCV005023336 uncertain significance Hereditary cancer-predisposing syndrome 2024-02-16 criteria provided, single submitter clinical testing The p.I1130T variant (also known as c.3389T>C), located in coding exon 17 of the BLM gene, results from a T to C substitution at nucleotide position 3389. The isoleucine at codon 1130 is replaced by threonine, an amino acid with similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Based on the available evidence, the clinical significance of this alteration remains unclear.

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