ClinVar Miner

Submissions for variant NM_000057.4(BLM):c.4144G>C (p.Ala1382Pro)

gnomAD frequency: 0.00001  dbSNP: rs771686396
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001361379 SCV001557354 uncertain significance Bloom syndrome 2022-10-11 criteria provided, single submitter clinical testing This variant has not been reported in the literature in individuals affected with BLM-related conditions. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt BLM protein function. ClinVar contains an entry for this variant (Variation ID: 1053081). This variant is present in population databases (rs771686396, gnomAD 0.002%). This sequence change replaces alanine, which is neutral and non-polar, with proline, which is neutral and non-polar, at codon 1382 of the BLM protein (p.Ala1382Pro).
Ambry Genetics RCV002329360 SCV002628934 uncertain significance Hereditary cancer-predisposing syndrome 2023-09-21 criteria provided, single submitter clinical testing The p.A1382P variant (also known as c.4144G>C), located in coding exon 21 of the BLM gene, results from a G to C substitution at nucleotide position 4144. The alanine at codon 1382 is replaced by proline, an amino acid with highly similar properties. This amino acid position is poorly conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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