ClinVar Miner

Submissions for variant NM_000057.4(BLM):c.570G>T (p.Lys190Asn)

dbSNP: rs2151147630
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001968098 SCV002219644 uncertain significance Bloom syndrome 2024-09-06 criteria provided, single submitter clinical testing This sequence change replaces lysine, which is basic and polar, with asparagine, which is neutral and polar, at codon 190 of the BLM protein (p.Lys190Asn). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with BLM-related conditions. ClinVar contains an entry for this variant (Variation ID: 1442093). An algorithm developed to predict the effect of missense changes on protein structure and function outputs the following: PolyPhen-2: "Benign". The asparagine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV004946917 SCV005544470 uncertain significance Hereditary cancer-predisposing syndrome 2024-06-30 criteria provided, single submitter clinical testing The p.K190N variant (also known as c.570G>T), located in coding exon 2 of the BLM gene, results from a G to T substitution at nucleotide position 570. The lysine at codon 190 is replaced by asparagine, an amino acid with similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Based on the available evidence, the clinical significance of this variant remains unclear.

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