ClinVar Miner

Submissions for variant NM_000059.4(BRCA2):c.10093G>T (p.Val3365Phe)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV003531114 SCV004310439 uncertain significance Hereditary breast ovarian cancer syndrome 2023-07-26 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. This sequence change replaces valine, which is neutral and non-polar, with phenylalanine, which is neutral and non-polar, at codon 3365 of the BRCA2 protein (p.Val3365Phe). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with BRCA2-related conditions. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt BRCA2 protein function. RNA analysis performed to evaluate the impact of this missense change on mRNA splicing indicates it does not significantly alter splicing (Invitae).
Ambry Genetics RCV004604980 SCV005102200 uncertain significance Hereditary cancer-predisposing syndrome 2024-04-28 criteria provided, single submitter clinical testing The p.V3365F variant (also known as c.10093G>T), located in coding exon 26 of the BRCA2 gene, results from a G to T substitution at nucleotide position 10093. The valine at codon 3365 is replaced by phenylalanine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Based on the available evidence, the clinical significance of this variant remains unclear.

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