ClinVar Miner

Submissions for variant NM_000059.4(BRCA2):c.2442del (p.Met815fs)

dbSNP: rs397507627
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Evidence-based Network for the Interpretation of Germline Mutant Alleles (ENIGMA) RCV000241109 SCV000300520 pathogenic Breast-ovarian cancer, familial, susceptibility to, 2 2016-09-08 reviewed by expert panel curation Variant allele predicted to encode a truncated non-functional protein.
Labcorp Genetics (formerly Invitae), Labcorp RCV000043995 SCV000072008 pathogenic Hereditary breast ovarian cancer syndrome 2023-08-28 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. ClinVar contains an entry for this variant (Variation ID: 51286). This variant is also known as 2670delC. This premature translational stop signal has been observed in individual(s) with breast and/or ovarian cancer (PMID: 10323242, 25927356, 29566657). This variant is present in population databases (rs760027075, gnomAD 0.006%). This sequence change creates a premature translational stop signal (p.Met815Trpfs*10) in the BRCA2 gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in BRCA2 are known to be pathogenic (PMID: 20104584).
Color Diagnostics, LLC DBA Color Health RCV000584478 SCV000688755 pathogenic Hereditary cancer-predisposing syndrome 2020-06-02 criteria provided, single submitter clinical testing This variant deletes 1 nucleotide in exon 11 of the BRCA2 gene, creating a frameshift and premature translation stop signal. This variant is expected to result in an absent or non-functional protein product. This variant has been reported in individuals affected with breast cancer (PMID: 10323242, 25927356). This variant has been identified in 1/244060 chromosomes in the general population by the Genome Aggregation Database (gnomAD). Loss of BRCA2 function is a known mechanism of disease (clinicalgenome.org). Based on the available evidence, this variant is classified as Pathogenic.
Baylor Genetics RCV003473313 SCV004210361 pathogenic Familial cancer of breast 2023-03-28 criteria provided, single submitter clinical testing
Ambry Genetics RCV000584478 SCV005550114 pathogenic Hereditary cancer-predisposing syndrome 2024-09-25 criteria provided, single submitter clinical testing The c.2442delC pathogenic mutation, located in coding exon 10 of the BRCA2 gene, results from a deletion of one nucleotide at nucleotide position 2442, causing a translational frameshift with a predicted alternate stop codon (p.M815Wfs*10). This alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay. As such, this alteration is interpreted as a disease-causing mutation.

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