ClinVar Miner

Submissions for variant NM_000059.4(BRCA2):c.8819A>G (p.Lys2940Arg)

dbSNP: rs200157227
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV000567588 SCV000668831 uncertain significance Hereditary cancer-predisposing syndrome 2021-12-17 criteria provided, single submitter clinical testing The p.K2940R variant (also known as c.8819A>G), located in coding exon 21 of the BRCA2 gene, results from an A to G substitution at nucleotide position 8819. The lysine at codon 2940 is replaced by arginine, an amino acid with highly similar properties. This amino acid position is well conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Labcorp Genetics (formerly Invitae), Labcorp RCV001223923 SCV001396093 uncertain significance Hereditary breast ovarian cancer syndrome 2024-08-27 criteria provided, single submitter clinical testing This sequence change replaces lysine, which is basic and polar, with arginine, which is basic and polar, at codon 2940 of the BRCA2 protein (p.Lys2940Arg). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with BRCA2-related conditions. ClinVar contains an entry for this variant (Variation ID: 483123). Invitae Evidence Modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) indicates that this missense variant is not expected to disrupt BRCA2 protein function with a negative predictive value of 95%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
MGZ Medical Genetics Center RCV003607319 SCV004543920 uncertain significance Familial cancer of breast 2024-02-09 criteria provided, single submitter clinical testing ACMG codes applied following ENIGMA VCEP rules: BP4, PM2_SUP
Baylor Genetics RCV003607319 SCV005059010 uncertain significance Familial cancer of breast 2024-03-06 criteria provided, single submitter clinical testing

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