ClinVar Miner

Submissions for variant NM_000064.4(C3):c.1433G>T (p.Arg478Leu)

gnomAD frequency: 0.00001  dbSNP: rs747968673
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000782235 SCV002282199 uncertain significance not provided 2024-11-06 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with leucine, which is neutral and non-polar, at codon 478 of the C3 protein (p.Arg478Leu). This variant is present in population databases (rs747968673, gnomAD 0.004%). This missense change has been observed in individual(s) with atypical hemolytic uremic syndrome (PMID: 20595690, 25608561). This variant is also known as R456L. ClinVar contains an entry for this variant (Variation ID: 633671). Invitae Evidence Modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) has been performed for this missense variant. However, the output from this modeling did not meet the statistical confidence thresholds required to predict the impact of this variant on C3 protein function. Experimental studies have shown that this missense change does not substantially affect C3 function (PMID: 25608561). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Fulgent Genetics, Fulgent Genetics RCV002507351 SCV002814693 uncertain significance Age related macular degeneration 9; Atypical hemolytic-uremic syndrome with C3 anomaly; Complement component 3 deficiency 2024-02-29 criteria provided, single submitter clinical testing
Gharavi Laboratory, Columbia University RCV000782235 SCV000920724 uncertain significance not provided 2018-09-16 no assertion criteria provided research

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