ClinVar Miner

Submissions for variant NM_000070.3(CAPN3):c.2465G>T (p.Ter822Leu)

gnomAD frequency: 0.00001  dbSNP: rs1162942997
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000692092 SCV000819899 uncertain significance Autosomal recessive limb-girdle muscular dystrophy type 2A 2022-07-30 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. This variant results in an extension of the CAPN3 protein. Other variant(s) that result in a similarly extended protein product (p.*822Argext*62) have been observed in individuals with CAPN3-related disease (PMID: 30919934). This suggests that these extensions may be clinically significant. ClinVar contains an entry for this variant (Variation ID: 571060). This protein extension has been observed in individual(s) with autosomal recessive limb-girdle muscular dystrophy type 2A (PMID: 24715573). In at least one individual the data is consistent with being in trans (on the opposite chromosome) from a pathogenic variant. It has also been observed to segregate with disease in related individuals. This variant is present in population databases (no rsID available, gnomAD 0.003%). This sequence change disrupts the translational stop signal of the CAPN3 mRNA. It is expected to extend the length of the CAPN3 protein by 62 additional amino acid residues.
Baylor Genetics RCV003472206 SCV004211505 likely pathogenic Muscular dystrophy, limb-girdle, autosomal dominant 4 2023-10-28 criteria provided, single submitter clinical testing

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