ClinVar Miner

Submissions for variant NM_000074.3(CD40LG):c.290A>G (p.Asp97Gly)

gnomAD frequency: 0.00001  dbSNP: rs1004051141
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV002039357 SCV002114417 uncertain significance Hyper-IgM syndrome type 1 2021-08-14 criteria provided, single submitter clinical testing This sequence change replaces aspartic acid with glycine at codon 97 of the CD40LG protein (p.Asp97Gly). The aspartic acid residue is moderately conserved and there is a moderate physicochemical difference between aspartic acid and glycine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals affected with CD40LG-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The glycine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may create or strengthen a splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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