ClinVar Miner

Submissions for variant NM_000088.4(COL1A1):c.1005T>A (p.Gly335=)

gnomAD frequency: 0.00016  dbSNP: rs375914028
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Total submissions: 11
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000377775 SCV000332062 benign not specified 2015-06-11 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000631511 SCV000752593 benign Osteogenesis imperfecta type I 2025-01-13 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV001124861 SCV001283862 likely benign Osteogenesis imperfecta 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). Publications were found based on this search. The evidence from the literature, in combination with allele frequency data from public databases where available, was sufficient to determine this variant is unlikely to cause disease. Therefore, this variant is classified as likely benign.
Illumina Laboratory Services, Illumina RCV001124862 SCV001283863 uncertain significance Ehlers-Danlos syndrome, arthrochalasia type 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases did not allow this variant to be ruled in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.
Illumina Laboratory Services, Illumina RCV001124863 SCV001283864 uncertain significance Infantile cortical hyperostosis 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases did not allow this variant to be ruled in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.
GeneDx RCV001711850 SCV001941272 likely benign not provided 2020-12-30 criteria provided, single submitter clinical testing This variant is associated with the following publications: (PMID: 21884818)
CeGaT Center for Human Genetics Tuebingen RCV001711850 SCV002545949 benign not provided 2022-10-01 criteria provided, single submitter clinical testing COL1A1: BS1, BS2
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV001124861 SCV002565115 likely benign Osteogenesis imperfecta 2021-10-13 criteria provided, single submitter clinical testing
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV002278262 SCV002565460 likely benign Ehlers-Danlos syndrome 2022-06-14 criteria provided, single submitter clinical testing
Ambry Genetics RCV002411144 SCV002721392 benign Cardiovascular phenotype 2020-07-21 criteria provided, single submitter clinical testing This alteration is classified as benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
PreventionGenetics, part of Exact Sciences RCV004547656 SCV004737143 likely benign COL1A1-related disorder 2019-05-07 no assertion criteria provided clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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