ClinVar Miner

Submissions for variant NM_000088.4(COL1A1):c.288del (p.Asp97fs)

dbSNP: rs2144593759
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001389739 SCV001591192 pathogenic Osteogenesis imperfecta type I 2022-11-29 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. ClinVar contains an entry for this variant (Variation ID: 1076006). This premature translational stop signal has been observed in individual(s) with osteogenesis imperfecta (Invitae). This variant is not present in population databases (gnomAD no frequency). This sequence change creates a premature translational stop signal (p.Asp97Thrfs*168) in the COL1A1 gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in COL1A1 are known to be pathogenic (PMID: 7942841, 9295084, 9443882).
Ambry Genetics RCV002438893 SCV002749635 pathogenic Cardiovascular phenotype 2021-06-25 criteria provided, single submitter clinical testing The c.288delC pathogenic mutation, located in coding exon 2 of the COL1A1 gene, results from a deletion of one nucleotide at nucleotide position 288, causing a translational frameshift with a predicted alternate stop codon (p.D97Tfs*168). This alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay. As such, this alteration is interpreted as a disease-causing mutation.
Fulgent Genetics, Fulgent Genetics RCV002499816 SCV002805063 pathogenic Osteogenesis imperfecta with normal sclerae, dominant form; Osteogenesis imperfecta, perinatal lethal; Osteogenesis imperfecta type III; Infantile cortical hyperostosis; Ehlers-Danlos syndrome, arthrochalasia type; Osteogenesis imperfecta type I; Osteoporosis; Combined osteogenesis imperfecta and Ehlers-Danlos syndrome 1 2021-11-17 criteria provided, single submitter clinical testing

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