ClinVar Miner

Submissions for variant NM_000088.4(COL1A1):c.3102T>C (p.Gly1034=)

gnomAD frequency: 0.00044  dbSNP: rs147743501
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Total submissions: 11
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000604486 SCV000727642 likely benign not specified 2018-02-12 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV000631509 SCV000752591 likely benign Osteogenesis imperfecta type I 2024-01-25 criteria provided, single submitter clinical testing
Center for Human Genetics, Inc, Center for Human Genetics, Inc RCV000680478 SCV000807856 likely benign Connective tissue disorder 2018-06-01 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV001310366 SCV001500134 likely benign not provided 2020-09-01 criteria provided, single submitter clinical testing
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV002279429 SCV002564719 likely benign Osteogenesis imperfecta 2019-01-01 criteria provided, single submitter clinical testing
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV002279430 SCV002565509 likely benign Ehlers-Danlos syndrome 2022-06-22 criteria provided, single submitter clinical testing
Ambry Genetics RCV002325177 SCV002605970 likely benign Cardiovascular phenotype 2019-06-07 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV001310366 SCV004563188 likely benign not provided 2023-10-18 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV004547742 SCV004759203 likely benign COL1A1-related disorder 2022-08-31 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Laboratory of Diagnostic Genome Analysis, Leiden University Medical Center (LUMC) RCV001310366 SCV002035749 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV001310366 SCV002038484 likely benign not provided no assertion criteria provided clinical testing

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