ClinVar Miner

Submissions for variant NM_000089.4(COL1A2):c.304C>T (p.Pro102Ser)

gnomAD frequency: 0.00060  dbSNP: rs189557655
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Total submissions: 13
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000710783 SCV000516946 likely benign not provided 2024-09-17 criteria provided, single submitter clinical testing See Variant Classification Assertion Criteria.
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000440701 SCV000603114 likely benign not specified 2019-06-27 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV001080558 SCV000627332 benign Osteogenesis imperfecta type I; Ehlers-Danlos syndrome, classic type, 1 2024-01-25 criteria provided, single submitter clinical testing
Eurofins Ntd Llc (ga) RCV000710783 SCV000703498 uncertain significance not provided 2016-12-19 criteria provided, single submitter clinical testing
Center for Human Genetics, Inc, Center for Human Genetics, Inc RCV000659368 SCV000781179 likely benign Connective tissue disorder 2016-11-01 criteria provided, single submitter clinical testing
Athena Diagnostics RCV000710783 SCV000841087 benign not provided 2017-11-16 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV001159491 SCV001321209 benign Osteogenesis imperfecta 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases was too high to be consistent with this variant causing disease. Therefore, this variant is classified as benign.
Illumina Laboratory Services, Illumina RCV001159492 SCV001321210 likely benign Ehlers-danlos syndrome, arthrochalasia type, 2 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases allowed determination this variant is unlikely to cause disease. Therefore, this variant is classified as likely benign.
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV001159491 SCV002564791 likely benign Osteogenesis imperfecta 2021-04-07 criteria provided, single submitter clinical testing
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV002278662 SCV002565582 likely benign Ehlers-Danlos syndrome 2021-02-01 criteria provided, single submitter clinical testing
Ambry Genetics RCV002446665 SCV002754115 likely benign Cardiovascular phenotype 2019-05-17 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Genome Diagnostics Laboratory, Amsterdam University Medical Center RCV000710783 SCV001807438 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000710783 SCV001968285 likely benign not provided no assertion criteria provided clinical testing

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