ClinVar Miner

Submissions for variant NM_000091.5(COL4A3):c.3182G>A (p.Gly1061Asp)

gnomAD frequency: 0.00025  dbSNP: rs202078295
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Illumina Laboratory Services, Illumina RCV001138909 SCV001299003 uncertain significance Alport syndrome 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
GeneDx RCV001664628 SCV001872730 uncertain significance not provided 2024-04-24 criteria provided, single submitter clinical testing Identified in a patient with renal failure in published literature, however, additional clinical information was not provided (PMID: 38357258); In silico analysis supports that this missense variant does not alter protein structure/function; Occurs in the triple helical domain within an interruption of the canonical Gly-X-Y repeat; This variant is associated with the following publications: (PMID: 38357258, 36134775)
Labcorp Genetics (formerly Invitae), Labcorp RCV001664628 SCV002408456 likely benign not provided 2024-03-21 criteria provided, single submitter clinical testing
Bioscientia Institut fuer Medizinische Diagnostik GmbH, Sonic Healthcare RCV001029944 SCV001192740 uncertain significance Autosomal dominant Alport syndrome 2019-11-25 no assertion criteria provided clinical testing
Natera, Inc. RCV001138909 SCV001465725 uncertain significance Alport syndrome 2020-11-04 no assertion criteria provided clinical testing

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