ClinVar Miner

Submissions for variant NM_000098.3(CPT2):c.989dup (p.Ile332fs)

dbSNP: rs1553169716
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Counsyl RCV000674271 SCV000799580 likely pathogenic Carnitine palmitoyl transferase II deficiency, severe infantile form 2018-04-26 criteria provided, single submitter clinical testing
Invitae RCV001218379 SCV001390260 pathogenic Carnitine palmitoyltransferase II deficiency 2023-11-06 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Ile332Hisfs*2) in the CPT2 gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in CPT2 are known to be pathogenic (PMID: 16781677, 16996287). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with CPT2-related conditions. ClinVar contains an entry for this variant (Variation ID: 558056). For these reasons, this variant has been classified as Pathogenic.
Fulgent Genetics, Fulgent Genetics RCV002493116 SCV002790168 likely pathogenic Carnitine palmitoyl transferase II deficiency, severe infantile form; Carnitine palmitoyl transferase II deficiency, myopathic form; Carnitine palmitoyl transferase II deficiency, neonatal form; Encephalopathy, acute, infection-induced, susceptibility to, 4 2022-02-09 criteria provided, single submitter clinical testing
Genome-Nilou Lab RCV000674271 SCV004179445 likely pathogenic Carnitine palmitoyl transferase II deficiency, severe infantile form 2023-04-11 criteria provided, single submitter clinical testing
Baylor Genetics RCV003472167 SCV004211040 likely pathogenic Encephalopathy, acute, infection-induced, susceptibility to, 4 2023-09-26 criteria provided, single submitter clinical testing

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