ClinVar Miner

Submissions for variant NM_000117.3(EMD):c.610C>G (p.Arg204Gly)

dbSNP: rs782299893
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000725843 SCV000339891 uncertain significance not provided 2016-03-03 criteria provided, single submitter clinical testing
GeneDx RCV000725843 SCV000535631 uncertain significance not provided 2017-01-03 criteria provided, single submitter clinical testing A variant of uncertain significance has been identified in the EMD gene. The R204G variant has not been published as a pathogenic variant, nor has it been reported as a benign variant to our knowledge. The R204G variant is a non-conservative amino acid substitution, which is likely to impact secondary protein structure as these residues differ in polarity, charge, size and/or other properties. However, this substitution occurs at a position that is not conserved across species, and in silico analysis is inconsistent in its predictions as to whether or not the variant is damaging to the protein structure/function. Finally, the Exome Aggregation Consortium (ExAC) reports R204G was observed in 17/9310 alleles (0.18%) in individuals of Latino background, including 5 hemizygous males, indicating it may be a rare benign variant in this population.Therefore, based on the currently available information, it is unclear whether this variant is pathogenic or rare benign. This result cannot be interpreted for diagnosis or used for family member screening at this time.
Labcorp Genetics (formerly Invitae), Labcorp RCV001088437 SCV001019838 likely benign X-linked Emery-Dreifuss muscular dystrophy 2024-01-20 criteria provided, single submitter clinical testing
Revvity Omics, Revvity RCV003492028 SCV003831907 uncertain significance Emery-Dreifuss muscular dystrophy 1, X-linked 2021-06-21 criteria provided, single submitter clinical testing
Ambry Genetics RCV004619245 SCV005114674 likely benign Cardiovascular phenotype 2024-05-01 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

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