ClinVar Miner

Submissions for variant NM_000126.4(ETFA):c.470T>G (p.Val157Gly)

gnomAD frequency: 0.00001  dbSNP: rs119458969
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV002281690 SCV002570501 likely pathogenic Multiple acyl-CoA dehydrogenase deficiency 2023-09-27 criteria provided, single submitter clinical testing Variant summary: ETFA c.470T>G (p.Val157Gly) results in a non-conservative amino acid change located in the N-terminal domain (IPR014730) of the encoded protein sequence. Five of five in-silico tools predict a damaging effect of the variant on protein function. The variant allele was found at a frequency of 2e-05 in 251054 control chromosomes. c.470T>G has been reported in the literature in at least two individuals affected with Glutaric Aciduria, Type 2a (Indo_1991, Freneaux_1992, Schiff_2006). These data indicate that the variant may be associated with disease. These publications also reported that the ETFA protein was almost undetectable and had a severely reduced enzyme activity in patient derived fibroblasts (Indo_1991, Freneaux_1992, Schiff_2006). The following publications have been ascertained in the context of this evaluation (PMID: 16546179, 33450351, 20674745, 16510302, 1430199, 1882842, 23867278). No submitters have cited clinical-significance assessments for this variant to ClinVar after 2014. Based on the evidence outlined above, the variant was classified as likely pathogenic.
Baylor Genetics RCV002281690 SCV004194721 pathogenic Multiple acyl-CoA dehydrogenase deficiency 2024-03-25 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV002281690 SCV005633286 likely pathogenic Multiple acyl-CoA dehydrogenase deficiency 2024-01-03 criteria provided, single submitter clinical testing
OMIM RCV000002711 SCV000022869 pathogenic Glutaric acidemia IIa 1992-11-01 no assertion criteria provided literature only

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