ClinVar Miner

Submissions for variant NM_000132.4(F8):c.5335G>A (p.Gly1779Arg)

dbSNP: rs1168919288
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV001803671 SCV002049945 pathogenic Hereditary factor VIII deficiency disease 2021-01-15 criteria provided, single submitter clinical testing The F8 c.5335G>A; p.Gly1779Arg variant (rs1168919288) is reported in the literature in multiple individuals affected with severe hemophilia A (see F8 database and references therein). In vitro functional analyses demonstrate that individuals with this variant have factor VIII activity of <1% (F8 database). Additionally, another variant resulting in the same amino acid change (c.5335G>C, p.Gly1779Arg) has been observed in an individual with severe hemophilia A (Johnsen 2017). This variant is absent from general population databases (Exome Variant Server, Genome Aggregation Database), indicating it is not a common polymorphism. Furthermore, another variant at this codon (c.5336A>G, p.Gly1779Glu) has been reported in individuals with severe hemophilia A and is considered pathogenic (Johnsen 2017). The glycine at codon 1779 is highly conserved, and computational analyses predict that this variant is deleterious (REVEL: 0.992). Based on available information, the c.5335G>A; p.Gly1779Arg variant is considered to be pathogenic. References: Link to F8 database: https://f8-db.eahad.org/ Johnsen JM et al. Novel approach to genetic analysis and results in 3000 hemophilia patients enrolled in the My Life, Our Future initiative. Blood Adv. 2017 May 18;1(13):824-834.

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