ClinVar Miner

Submissions for variant NM_000135.4(FANCA):c.3244C>T (p.Leu1082Phe)

dbSNP: rs2038477938
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001867018 SCV002126748 uncertain significance Fanconi anemia 2023-12-07 criteria provided, single submitter clinical testing This sequence change replaces leucine, which is neutral and non-polar, with phenylalanine, which is neutral and non-polar, at codon 1082 of the FANCA protein (p.Leu1082Phe). This variant is not present in population databases (gnomAD no frequency). This missense change has been observed in individual(s) with clinical features of Fanconi anemia (PMID: 10807541). ClinVar contains an entry for this variant (Variation ID: 1355637). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt FANCA protein function with a positive predictive value of 80%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Fulgent Genetics, Fulgent Genetics RCV005014711 SCV005644726 uncertain significance Fanconi anemia complementation group A 2024-03-02 criteria provided, single submitter clinical testing

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