ClinVar Miner

Submissions for variant NM_000135.4(FANCA):c.710-5T>C

dbSNP: rs2040523640
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001052274 SCV001216476 pathogenic Fanconi anemia 2021-06-11 criteria provided, single submitter clinical testing This sequence change falls in intron 7 of the FANCA gene. It does not directly change the encoded amino acid sequence of the FANCA protein. RNA analysis indicates that this variant induces altered splicing and may result in an absent or disrupted protein product. This variant is not present in population databases (ExAC no frequency). This variant has been observed in individual(s) with autosomal recessive Fanconi anemia (PMID: 21273304, 24704046). It has also been observed to segregate with disease in related individuals. ClinVar contains an entry for this variant (Variation ID: 848504). Studies have shown that this variant is associated with skipping of exon 8, which introduces a premature termination codon (PMID: 24704046). The resulting mRNA is expected to undergo nonsense-mediated decay. For these reasons, this variant has been classified as Pathogenic.
Leiden Open Variation Database RCV001256223 SCV001425628 pathogenic Fanconi anemia complementation group A 2020-02-28 no assertion criteria provided curation Curator: Arleen D. Auerbach. Submitter to LOVD: Arleen D. Auerbach.

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