ClinVar Miner

Submissions for variant NM_000136.3(FANCC):c.1006G>T (p.Ala336Ser)

dbSNP: rs78555330
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000797751 SCV000937330 uncertain significance Fanconi anemia 2022-07-31 criteria provided, single submitter clinical testing This sequence change replaces alanine, which is neutral and non-polar, with serine, which is neutral and polar, at codon 336 of the FANCC protein (p.Ala336Ser). The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database. This variant has not been reported in the literature in individuals affected with FANCC-related conditions. ClinVar contains an entry for this variant (Variation ID: 643933). Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The serine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002422721 SCV002730236 uncertain significance Hereditary cancer-predisposing syndrome 2022-09-13 criteria provided, single submitter clinical testing The p.A336S variant (also known as c.1006G>T), located in coding exon 10 of the FANCC gene, results from a G to T substitution at nucleotide position 1006. The alanine at codon 336 is replaced by serine, an amino acid with similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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