ClinVar Miner

Submissions for variant NM_000136.3(FANCC):c.596T>C (p.Leu199Pro)

dbSNP: rs143213659
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001058577 SCV001223160 uncertain significance Fanconi anemia 2022-09-01 criteria provided, single submitter clinical testing This sequence change replaces leucine, which is neutral and non-polar, with proline, which is neutral and non-polar, at codon 199 of the FANCC protein (p.Leu199Pro). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with FANCC-related conditions. ClinVar contains an entry for this variant (Variation ID: 853711). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002355057 SCV002656511 uncertain significance Hereditary cancer-predisposing syndrome 2021-12-12 criteria provided, single submitter clinical testing The p.L199P variant (also known as c.596T>C), located in coding exon 6 of the FANCC gene, results from a T to C substitution at nucleotide position 596. The leucine at codon 199 is replaced by proline, an amino acid with similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Natera, Inc. RCV001274486 SCV001458709 uncertain significance Fanconi anemia complementation group C 2020-09-16 no assertion criteria provided clinical testing

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