ClinVar Miner

Submissions for variant NM_000138.5(FBN1):c.2892C>T (p.Asp964=)

gnomAD frequency: 0.00010  dbSNP: rs116945525
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001082629 SCV000557042 benign Marfan syndrome; Familial thoracic aortic aneurysm and aortic dissection 2024-01-08 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000586312 SCV000695497 benign not provided 2016-07-15 criteria provided, single submitter clinical testing Variant summary: The FBN1 c.2892C>T (p.Asp964Asp) variant involves the alteration of a non-conserved nucleotide located in TB domain, resulting in a synonymous change. One in silico tool predicts a damaging outcome for this variant. 5/5 splice prediction tools predict no significant impact on normal splicing. ESE finder predicts that this variant may affect multiple ESE sites. However, these predictions have yet to be confirmed by functional studies. This variant was found in 44/120976 control chromosomes, predominantly observed in the East Asian subpopulation at a frequency of 0.0037011 (32/8646). This frequency is about 33 times the estimated maximal expected allele frequency of a pathogenic FBN1 variant (0.0001125), suggesting this is likely a benign polymorphism found primarily in the populations of East Asian origin. In addition, one internal sample carries the variant of interest and c.4337-1G>A (classified pathogenic). Taken together, this variant is classified as benign.
Eurofins Ntd Llc (ga) RCV000731641 SCV000859485 likely benign not specified 2018-02-14 criteria provided, single submitter clinical testing
GeneDx RCV000586312 SCV000984230 likely benign not provided 2019-05-23 criteria provided, single submitter clinical testing
Color Diagnostics, LLC DBA Color Health RCV001185989 SCV001352310 benign Familial thoracic aortic aneurysm and aortic dissection 2018-11-03 criteria provided, single submitter clinical testing
Ambry Genetics RCV001185989 SCV002750562 likely benign Familial thoracic aortic aneurysm and aortic dissection 2019-01-23 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
All of Us Research Program, National Institutes of Health RCV004002114 SCV004814861 benign Marfan syndrome 2023-12-18 criteria provided, single submitter clinical testing

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