ClinVar Miner

Submissions for variant NM_000138.5(FBN1):c.3295G>A (p.Glu1099Lys)

gnomAD frequency: 0.00004  dbSNP: rs763485521
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000556661 SCV000627889 likely benign Marfan syndrome; Familial thoracic aortic aneurysm and aortic dissection 2023-09-10 criteria provided, single submitter clinical testing
Color Diagnostics, LLC DBA Color Health RCV001191187 SCV001358913 uncertain significance Familial thoracic aortic aneurysm and aortic dissection 2023-05-17 criteria provided, single submitter clinical testing This missense variant replaces glutamic acid with lysine at codon 1099 of the FBN1 protein. Computational prediction suggests that this variant may not impact protein structure and function (internally defined REVEL score threshold <= 0.5, PMID: 27666373). Splice site prediction tools suggest that this variant may not impact RNA splicing. To our knowledge, functional studies have not been performed for this variant. This variant has not been reported in individuals affected with cardiovascular disorders in the literature. This variant has been identified in 6/282882 chromosomes in the general population by the Genome Aggregation Database (gnomAD). The available evidence is insufficient to determine the role of this variant in disease conclusively. Therefore, this variant is classified as a Variant of Uncertain Significance.
Fulgent Genetics, Fulgent Genetics RCV002476105 SCV002792883 uncertain significance Ectopia lentis 1, isolated, autosomal dominant; Marfan syndrome; MASS syndrome; Stiff skin syndrome; Weill-Marchesani syndrome 2, dominant; Acromicric dysplasia; Geleophysic dysplasia 2; Progeroid and marfanoid aspect-lipodystrophy syndrome 2021-08-13 criteria provided, single submitter clinical testing
All of Us Research Program, National Institutes of Health RCV000663623 SCV004814817 uncertain significance Marfan syndrome 2023-12-01 criteria provided, single submitter clinical testing This missense variant replaces glutamic acid with lysine at codon 1099 of the FBN1 protein. Computational prediction suggests that this variant may not impact protein structure and function (internally defined REVEL score threshold <= 0.5, PMID: 27666373). Splice site prediction tools suggest that this variant may not impact RNA splicing. To our knowledge, functional studies have not been performed for this variant. This variant has not been reported in individuals affected with cardiovascular disorders in the literature. This variant has been identified in 6/282882 chromosomes in the general population by the Genome Aggregation Database (gnomAD). The available evidence is insufficient to determine the role of this variant in disease conclusively. Therefore, this variant is classified as a Variant of Uncertain Significance.
Ambry Genetics RCV001191187 SCV005113160 uncertain significance Familial thoracic aortic aneurysm and aortic dissection 2024-05-28 criteria provided, single submitter clinical testing The p.E1099K variant (also known as c.3295G>A), located in coding exon 26 of the FBN1 gene, results from a G to A substitution at nucleotide position 3295. The glutamic acid at codon 1099 is replaced by lysine, an amino acid with similar properties. This amino acid position is not well conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Based on the available evidence, the clinical significance of this variant remains unclear.
Center for Medical Genetics Ghent, University of Ghent RCV000663623 SCV000786945 uncertain significance Marfan syndrome 2017-11-07 no assertion criteria provided clinical testing

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