ClinVar Miner

Submissions for variant NM_000138.5(FBN1):c.5995A>G (p.Ile1999Val)

dbSNP: rs183690919
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001036008 SCV001199351 uncertain significance Marfan syndrome; Familial thoracic aortic aneurysm and aortic dissection 2022-01-04 criteria provided, single submitter clinical testing This sequence change replaces isoleucine, which is neutral and non-polar, with valine, which is neutral and non-polar, at codon 1999 of the FBN1 protein (p.Ile1999Val). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0"). ClinVar contains an entry for this variant (Variation ID: 835183). This variant has not been reported in the literature in individuals affected with FBN1-related conditions. This variant is present in population databases (rs183690919, gnomAD no frequency).
Color Diagnostics, LLC DBA Color Health RCV001185446 SCV001351645 uncertain significance Familial thoracic aortic aneurysm and aortic dissection 2020-02-03 criteria provided, single submitter clinical testing This missense variant replaces isoleucine with valine at codon 1999 of the FBN1 protein. Computational prediction suggests that this variant may not impact protein structure and function (internally defined REVEL score threshold <= 0.5, PMID: 27666373). Splice site prediction tools suggest that this variant may not impact RNA splicing. To our knowledge, functional studies have not been performed for this variant. This variant has not been reported in individuals affected with cardiovascular disorders in the literature. This variant has not been identified in the general population by the Genome Aggregation Database (gnomAD). The available evidence is insufficient to determine the role of this variant in disease conclusively. Therefore, this variant is classified as a Variant of Uncertain Significance.
Fulgent Genetics, Fulgent Genetics RCV002489540 SCV002786977 uncertain significance Ectopia lentis 1, isolated, autosomal dominant; Marfan syndrome; MASS syndrome; Stiff skin syndrome; Weill-Marchesani syndrome 2, dominant; Acromicric dysplasia; Geleophysic dysplasia 2; Progeroid and marfanoid aspect-lipodystrophy syndrome 2021-07-20 criteria provided, single submitter clinical testing
All of Us Research Program, National Institutes of Health RCV004004698 SCV004814614 uncertain significance Marfan syndrome 2023-02-10 criteria provided, single submitter clinical testing This missense variant replaces isoleucine with valine at codon 1999 of the FBN1 protein. Computational prediction suggests that this variant may not impact protein structure and function (internally defined REVEL score threshold <= 0.5, PMID: 27666373). Splice site prediction tools suggest that this variant may not impact RNA splicing. To our knowledge, functional studies have not been performed for this variant. This variant has not been reported in individuals affected with cardiovascular disorders in the literature. This variant has not been identified in the general population by the Genome Aggregation Database (gnomAD). The available evidence is insufficient to determine the role of this variant in disease conclusively. Therefore, this variant is classified as a Variant of Uncertain Significance.

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