ClinVar Miner

Submissions for variant NM_000138.5(FBN1):c.6055G>A (p.Glu2019Lys)

gnomAD frequency: 0.00004  dbSNP: rs377149130
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
CeGaT Center for Human Genetics Tuebingen RCV000761911 SCV000892131 likely benign not provided 2018-08-01 criteria provided, single submitter clinical testing
Color Diagnostics, LLC DBA Color Health RCV001178617 SCV001343108 uncertain significance Familial thoracic aortic aneurysm and aortic dissection 2023-06-07 criteria provided, single submitter clinical testing This missense variant replaces glutamic acid with lysine at codon 2019 of the FBN1 protein. Computational prediction suggests that this variant may not impact protein structure and function (internally defined REVEL score threshold <= 0.5, PMID: 27666373). Splice site prediction tools suggest that this variant may not impact RNA splicing. To our knowledge, functional studies have not been performed for this variant. This variant has been reported in two individuals who did not meet Marfan syndrome diagnosis but had a family history of Marfan syndrome (PMID: 21883168). This variant has been reported in an individual affected with sporadic sporadic abdominal aortic aneurysm (PMID 26017485). This variant has been identified in 6/281986 chromosomes in the general population by the Genome Aggregation Database (gnomAD). The available evidence is insufficient to determine the role of this variant in disease conclusively. Therefore, this variant is classified as a Variant of Uncertain Significance.
Labcorp Genetics (formerly Invitae), Labcorp RCV002533889 SCV003466303 likely benign Marfan syndrome; Familial thoracic aortic aneurysm and aortic dissection 2024-01-05 criteria provided, single submitter clinical testing
All of Us Research Program, National Institutes of Health RCV003999912 SCV004814606 uncertain significance Marfan syndrome 2023-11-30 criteria provided, single submitter clinical testing This missense variant replaces glutamic acid with lysine at codon 2019 of the FBN1 protein. Computational prediction suggests that this variant may not impact protein structure and function (internally defined REVEL score threshold <= 0.5, PMID: 27666373). Splice site prediction tools suggest that this variant may not impact RNA splicing. To our knowledge, functional studies have not been performed for this variant. This variant has been reported in two individuals who did not meet Marfan syndrome diagnosis but had a family history of Marfan syndrome (PMID: 21883168). This variant has been reported in an individual affected with sporadic sporadic abdominal aortic aneurysm (PMID 26017485). This variant has been identified in 6/281986 chromosomes in the general population by the Genome Aggregation Database (gnomAD). The available evidence is insufficient to determine the role of this variant in disease conclusively. Therefore, this variant is classified as a Variant of Uncertain Significance.
Genome Diagnostics Laboratory, Amsterdam University Medical Center RCV000761911 SCV001809238 uncertain significance not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000761911 SCV001965120 uncertain significance not provided no assertion criteria provided clinical testing

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